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This commit is contained in:
François Boulogne 2025-06-20 13:35:19 +02:00
parent 12922f0f79
commit a9df27b7c7
13 changed files with 43 additions and 40 deletions
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2
tests/test_SV1.py
View file

@ -23,7 +23,7 @@ def load():
@pytest.mark.parametrize("spectrum_path, expected", load())
def test_minmax(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
assert_equal(len(lambdas), len(smoothed_intensities))

16
tests/test_SV2o0.py
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@ -24,11 +24,11 @@ def load(filename):
#@pytest.mark.skip('...')
@pytest.mark.parametrize("spectrum_path, expected", load('known_value.yaml'))
def test_SV2o0_small_tol(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
File_I_min = 'tests/spectre_trou/000043641.xy'
_, intensities_void = load_spectrum(File_I_min, lambda_min=450)
_, intensities_void = load_spectrum(File_I_min, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)
@ -54,11 +54,11 @@ def test_SV2o0_small_tol(spectrum_path, expected):
@pytest.mark.parametrize("spectrum_path, expected", load('known_value_large_tol.yaml'))
def test_SV2o0_large_tol(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
File_I_min = 'tests/spectre_trou/000043641.xy'
_, intensities_void = load_spectrum(File_I_min, lambda_min=450)
_, intensities_void = load_spectrum(File_I_min, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

2
tests/test_SV2o1.py
View file

@ -24,7 +24,7 @@ def load():
#@pytest.mark.skip('...')
@pytest.mark.parametrize("spectrum_path, expected", load())
def test_SV2o1(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

2
tests/test_SV2o2.py
View file

@ -23,7 +23,7 @@ def load():
@pytest.mark.parametrize("spectrum_path, expected", load())
def test_SV2o2(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

2
tests/test_SV2o3.py
View file

@ -23,7 +23,7 @@ def load():
@pytest.mark.parametrize("spectrum_path, expected", load())
def test_SV2o3(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

2
tests/test_SV2o4.py
View file

@ -23,7 +23,7 @@ def load():
@pytest.mark.parametrize("spectrum_path, expected", load())
def test_SV2o4(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

2
tests/test_SV2o5.py
View file

@ -23,7 +23,7 @@ def load():
@pytest.mark.parametrize("spectrum_path, expected", load())
def test_SV2o5(spectrum_path, expected):
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

2
tests/test_fft.py
View file

@ -14,7 +14,7 @@ def test_FFT():
expected = 3524.51
spectrum_path = os.path.join(FOLDER, FILE_NAME)
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

4
tests/test_minmax.py
View file

@ -14,7 +14,7 @@ def test_minmax_ransac():
expected = 1338.35
spectrum_path = os.path.join(FOLDER, FILE_NAME)
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)
@ -36,7 +36,7 @@ def test_minmax_linreg():
expected = 1338.35
spectrum_path = os.path.join(FOLDER, FILE_NAME)
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)

12
tests/test_scheludko.py
View file

@ -17,7 +17,7 @@ def dataset1():
expected = 777.07
spectrum_path = os.path.join(FOLDER, FILE_NAME)
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)
@ -97,7 +97,7 @@ def test_scheludko_2peaks():
expected = 495.69
spectrum_path = os.path.join(FOLDER, FILE_NAME)
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)
@ -127,14 +127,14 @@ def test_order0():
expected = 115.33
spectrum_path = os.path.join(FOLDER, FILE_NAME)
lambdas, raw_intensities = load_spectrum(spectrum_path, lambda_min=450)
lambdas, raw_intensities = load_spectrum(spectrum_path, wavelength_min=450)
smoothed_intensities = smooth_intensities(raw_intensities)
r_index = 1.324188 + 3102.060378 / (lambdas**2)
prominence = 0.03
File_I_min = 'tests/spectre_trou/000043641.xy'
_, intensities_void = load_spectrum(File_I_min, lambda_min=450)
_, intensities_void = load_spectrum(File_I_min, wavelength_min=450)
w_start, w_stop = None, None