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This commit is contained in:
François Boulogne 2025-06-04 13:20:13 +02:00
parent d5fae56eb4
commit 1800675fd3
5 changed files with 107 additions and 109 deletions
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optifik/auto.py
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@ -1,88 +0,0 @@
import os.path
from .analysis import *
from .io import load_spectrum
def auto(spectrum_file, plot=None):
spectre_file = spectrum_file
##### Affichage du spectre brut et récupération des Intesités brutes#####
lambdas, raw_intensities = load_spectrum(spectre_file, lambda_min=450)
##### Affichage du spectre lissé #####
#smoothed_intensities, intensities, lambdas = Data_Smoothed(spectre_file)
smoothed_intensities = smooth_intensities(raw_intensities)
##### Indice Optique en fonction de Lambda #####
indice = 1.324188 + 3102.060378 / (lambdas**2)
##### Determination de la prominence associé #####
prominence, signal, wavelength = Prominence_from_fft(lambdas,
smoothed_intensities,
refractive_index=indice,
plot=plot)
prominence = 0.03
##### Find Peak #####
peaks_min, peaks_max = finds_peak(lambdas, smoothed_intensities,
min_peak_prominence=prominence,
plot=False)
##### Epaisseur selon la methode #####
#thickness_FFT = thickness_from_fft(lambdas,smoothed_intensities,refractive_index=1.33)
total_extrema = len(peaks_max) + len(peaks_min)
if total_extrema > 15 and total_extrema > 4:
print('Apply method FFT')
result = thickness_from_fft(lambdas, smoothed_intensities,
refractive_index=indice,
plot=plot)
print(f'thickness: {result.thickness:.2f} nm')
if total_extrema <= 15 and total_extrema > 4:
print('Apply method minmax')
result = thickness_from_minmax(lambdas, smoothed_intensities,
refractive_index=indice,
min_peak_prominence=prominence,
plot=plot)
print(f'thickness: {result.thickness:.2f} nm')
if total_extrema <= 4 and total_extrema >= 2: #& 2peak minimum:
print('Apply method Scheludko')
result = thickness_from_scheludko(lambdas, smoothed_intensities,
refractive_index=indice,
min_peak_prominence=prominence,
plot=plot)
print(f'thickness: {result.thickness:.2f} nm')
if total_extrema <= 4 and len(peaks_max) == 1 and len(peaks_min) == 0 : #dans l'ordre zéro !
print('Apply method ordre0')
result = thickness_for_order0(lambdas, smoothed_intensities,
refractive_index=indice,
min_peak_prominence=prominence,
plot=plot)
print(f'thickness: {result.thickness:.2f} nm')
if total_extrema <= 4 and len(peaks_max) == 0 and (len(peaks_min) == 1 or len(peaks_min) == 0):
#& 1peak min ou zéro:
thickness = None
print('Zone Ombre')